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BaseInfo

ncRNA ID novel_vvi_miR271
Species Vitis vinifera
Class miRNA
Genome position Chr17:5521583-5521667 [+]
Reference genome 12X
Source SRR1528351;SRR1528359;SRR1528374;SRR1528375;SRR1528380;SRR1048207;SRR1528381;SRR1528398;SRR1528409;SRR1528417;SRR2029784
Length 20
Mature sequence(if miRNA) 1 - GGAAUGGGUGGCUGGGAUCU - 20
Stem-loop(if miRNA) --            -     U     ---    --CUU      A
  GGAAUGGGUGGC UGGGA CUAAU   GUUU     CACAUC U
  |||||||||||| ||||| |||||   ||||     |||||| G
  CCUUACCUACCG ACCCU GGUUG   CGAA     GUGUAG U
AU            U     U     AGU    AAACU      A
Stem-loop sequence GGAAUGGGUGGCUGGGAUCUAAUGUUUCUUCACAUCAUGUAGAUGUGUCAAAAAGCUGAGUUGGUUCCCAUGCCAUCCAUUCCUA