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BaseInfo

ncRNA ID	novel_vvi_miR270
Species	Vitis vinifera
Class	miRNA
Genome position	Chr1:6482124-6482189 [+]
Reference genome	12X
Source	SRR1528351;SRR1528356;SRR1528357;SRR1528370;SRR1528371;SRR1048205;SRR1528374;SRR1528377;SRR1528380;SRR1048206;SRR1048207;SRR1528381;SRR1528383;SRR1528391;SRR1528393;SRR1528396;SRR1528399;SRR1528405;SRR1528409;SRR1528411;SRR1528417;SRR2029783;SRR2029784;SRR1049295
Length	21
Mature sequence(if miRNA)	46 - CUGAAGUGUUUGGGGGAACUC - 66
Stem-loop(if miRNA)	--       UG         U       CCUUA   GUUCCCC  AGCACUUCA UGGGGAU     G   |||||||  ||||||||| |||||||   CAAGGGG  UUGUGAAGU AUCCUUA     U CU       GU         C       ACUUU
Stem-loop sequence	GUUCCCCUGAGCACUUCAUUGGGGAUCCUUAGUUUUCAAUUCCUACUGAAGUGUUUGGGGGAACUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA152876.1	ncRNA:21   CUCAAGGGGGUUUGUGAAGUC   1   |||*||=|||||||||||||| targets:128   GAGCUCUCCCAAACACUUCAG   148 Target Full Sequence	2.0	TSA: Vitis vinifera Locus_15568_Transcript_1/3_Confidence_0.600.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010665998.2	ncRNA:21   CUCAAGGGGGUUUGUGAAGUC   1   |||*||=|||||||||||||| targets:157   GAGCUCUCCCAAACACUUCAG   177 Target Full Sequence	2.0	PREDICTED: Vitis vinifera low affinity sulfate transporter 3 (LOC100252269), mRNA	NA	coding protein	psRNATarget
KA152875.1	ncRNA:21   CUCAAGGGGGUUUGUGAAGUC   1   |||*||=|||||||||||||| targets:325   GAGCUCUCCCAAACACUUCAG   345 Target Full Sequence	2.0	TSA: Vitis vinifera Locus_15568_Transcript_2/3_Confidence_0.600.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010654522.2	ncRNA:21   CUCAAGGGGGUUUGUGAAGUC   1   *|||||=|||||||||||||* targets:383   AAGUUCUCCCAAACACUUCAA   403 Target Full Sequence	2.0	PREDICTED: Vitis vinifera low affinity sulfate transporter 3 (LOC100257574), mRNA	NA	coding protein	psRNATarget