ncRNA ID | lus-miR171h |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - AUGAGCCGAACCAAUAUCACU - NA |
Stem-loop(if miRNA) |
   --C  -U      -     G   C  C            G          AUCUCG     CU GGG   CG  UGGAGA AAGUA ACA GA GUGGUAUUGGUU CGGCUCGUCG      GACGG  U |||   ||  |||||| ||||| ||| || |||||||||||| ||||||||||      ||||| CCU   GC  GCCUUU UUCGU UGU CU CACUAUAACCAA GCCGAGUAGC      CUGCC  U    UUU  UU      C     A   U  -            -          --CUCG     AG |
Stem-loop sequence | GGGCCGUUGGAGAAAGUAGACACGACGUGGUAUUGGUUGCGGCUCGUCGAUCUCGGACGGCUUUGACCGUCGCUCCGAUGAGCCGAACCAAUAUCACUCUUGUAUGCUUCUUUCCGUUCGUUUUCC |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |