Search result

BaseInfo

ncRNA ID lus-miR171g
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UGAUUGAGCCGCGUCAAUAUC - NA
Stem-loop(if miRNA) U     AU  U  UCCU  A                        -G           AAUAUUGAUA   GAUGAUGGAUGACCGAAU
 GAGUA  GA GA    GA GGUAUUGGCGCGGCUCAAUCGGAA  ACAUGGCUAAU          CCA                  G
 |||||  || ||    || ||||||||||||||||||||||||  |||||||||||          |||                  A
 CUCAU  CU CU    CU CUAUAACUGCGCCGAGUUAGUUUU  UGUACCGAUUA          GUA                  G
A     --  U  ---C  C                        AG           ---AUUAGUA   GUUAGAAUAGUUAUAAAU
Stem-loop sequence UGAGUAAUGAUGAUCCUGAAGGUAUUGGCGCGGCUCAAUCGGAAGACAUGGCUAAUAAUAUUGAUACCAGAUGAUGGAUGACCGAAUGAGUAAAUAUUGAUAAGAUUGAUGAUGAUUAAUUAGCCAUGUGAUUUUGAUUGAGCCGCGUCAAUAUCCUCCUCUUCUACUCA

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).