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BaseInfo

ncRNA ID lus-miR171e
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UGAUUGAGCCGUGCCAAUAUC - NA
Stem-loop(if miRNA) UUUUC     GUACAUA        C U  C  C         C       C       C    CAU
     UUCUU       AUGAAAGG G CA UG GGUAUUGGC CGGUUCA UCAGACA AGUA   G
     |||||       |||||||| | || || ||||||||| ||||||| ||||||| ||||
     AAGAA       UACUUUCC C GU AC CUAUAACCG GCCGAGU AGUUUGU UUAU   U
---AA     -AGCCCC        A -  A  U         U       U       -    UAU
Stem-loop sequence UUUUCUUCUUGUACAUAAUGAAAGGCGUCACUGCGGUAUUGGCCCGGUUCACUCAGACACAGUACAUGUUAUUAUUUGUUUGAUUGAGCCGUGCCAAUAUCUCAAUGCACCUUUCAUCCCCGAAAGAAAA

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).