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BaseInfo

ncRNA ID lus-miR171d
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - AGAUAUUGGUGCGGUUCAAUC - NA
Stem-loop(if miRNA) GUCU  UG    A       GU           A   -    CG       -CG A
    GG  UACG GAUAUUG  GCGGUUCAAUC GAG AGCA  UCUCCUA   C C
    ||  |||| |||||||  ||||||||||| ||| ||||  |||||||   | A
    CC  GUGC CUAUAAC  CGCCGAGUUAG CUU UCGU  AGGGGGU   G U
CACU  UU    C       UG           -   A    --       AAA C
Stem-loop sequence GUCUGGUGUACGAGAUAUUGGUGCGGUUCAAUCAGAGAGCACGUCUCCUACGCACAUCGAAAUGGGGGAUGCUAUUCGAUUGAGCCGCGUCAAUAUCCCGUGUUCCUCAC

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).