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BaseInfo

ncRNA ID lus-miR171c
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UGAUUGAGCCGUGCCAAUAUC - NA
Stem-loop(if miRNA) U      UGAU  C    U       C       C     -   AAGAU  C UU     U
 GAAAGG    CA UGAG UAUUGGC CGGUUCA UCAGA UGG     GC G  UAAUU U
 ||||||    || |||| ||||||| ||||||| ||||| |||     || |  ||||| C
 CUUUCC    GU ACUC AUAACCG GCCGAGU AGUUU ACU     CG C  AUUAA U
A      --UC  A    U       U       U     U   CGAUC  A UU     U
Stem-loop sequence UGAAAGGUGAUCACUGAGUUAUUGGCCCGGUUCACUCAGAUGGAAGAUGCCGUUUAAUUUUCUUAAUUAUUCAGCCUAGCUCAUUUUGAUUGAGCCGUGCCAAUAUCUCAAUGCUCCUUUCA

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).