ncRNA ID | lus-miR171c |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - UGAUUGAGCCGUGCCAAUAUC - NA |
Stem-loop(if miRNA) |
U      UGAU  C    U       C       C     -   AAGAU  C UU     U  GAAAGG    CA UGAG UAUUGGC CGGUUCA UCAGA UGG     GC G  UAAUU U  ||||||    || |||| ||||||| ||||||| ||||| |||     || |  ||||| C  CUUUCC    GU ACUC AUAACCG GCCGAGU AGUUU ACU     CG C  AUUAA U A      --UC  A    U       U       U     U   CGAUC  A UU     U |
Stem-loop sequence | UGAAAGGUGAUCACUGAGUUAUUGGCCCGGUUCACUCAGAUGGAAGAUGCCGUUUAAUUUUCUUAAUUAUUCAGCCUAGCUCAUUUUGAUUGAGCCGUGCCAAUAUCUCAAUGCUCCUUUCA |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |