Search result

BaseInfo

ncRNA ID novel_vvi_miR199
Species Vitis vinifera
Class miRNA
Genome position Chr6:15575592-15575659 [+]
Reference genome 12X
Source SRR1049372;SRR1528351;SRR1528352;SRR1528353;SRR1528358;SRR1528363;SRR1528364;SRR1528365;SRR1528368;SRR1528371;SRR1528372;SRR1528373;SRR1528380;SRR1048207;SRR1528383;SRR1048208;SRR1528384;SRR1528391;SRR1528393;SRR1528394;SRR1049289;SRR1528407;SRR1528408;SRR1049290;SRR1528411;SRR1528412;SRR2029783;SRR2029784;SRR1049294;SRR1049295
Length 22
Mature sequence(if miRNA) 1 - GGAGUGACCUGAGAAUCACAUG - 22
Stem-loop(if miRNA) --  A            U      CCC   UCAC
  GG GUGACCUGAGAA CACAUG   GCA    C
  || |||||||||||| ||||||   |||    C
  CC CGCUGGACUCUU GUGUAC   CGU    A
GU  C            -      UCU   UUCU
Stem-loop sequence GGAGUGACCUGAGAAUCACAUGCCCGCAUCACCCAUCUUUGCUCUCAUGUGUUCUCAGGUCGCCCCUG