ncRNA ID | novel_vvi_miR199 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr6:15575592-15575659 [+] |
Reference genome | 12X |
Source | SRR1049372;SRR1528351;SRR1528352;SRR1528353;SRR1528358;SRR1528363;SRR1528364;SRR1528365;SRR1528368;SRR1528371;SRR1528372;SRR1528373;SRR1528380;SRR1048207;SRR1528383;SRR1048208;SRR1528384;SRR1528391;SRR1528393;SRR1528394;SRR1049289;SRR1528407;SRR1528408;SRR1049290;SRR1528411;SRR1528412;SRR2029783;SRR2029784;SRR1049294;SRR1049295 |
Length | 22 |
Mature sequence(if miRNA) | 1 - GGAGUGACCUGAGAAUCACAUG - 22 |
Stem-loop(if miRNA) |
--  A            U      CCC   UCAC   GG GUGACCUGAGAA CACAUG   GCA    C   || |||||||||||| ||||||   |||    C   CC CGCUGGACUCUU GUGUAC   CGU    A GU  C            -      UCU   UUCU |
Stem-loop sequence | GGAGUGACCUGAGAAUCACAUGCCCGCAUCACCCAUCUUUGCUCUCAUGUGUUCUCAGGUCGCCCCUG |