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BaseInfo

ncRNA ID lus-miR171b
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UGAUUGAGCCGUGCCAAUAUC - NA
Stem-loop(if miRNA)      U  A  UAUAA       C  CAC  C         C       C      ACA   CGCUAGCG
CUUGU GU UG     UGAAAGG GC   UG GGUAUUGGC CGGUUCA UCAGAC   GCU        C
||||| || ||     ||||||| ||   || ||||||||| ||||||| ||||||   |||
GAACG UA GC     ACUUUCC CG   AC CUAUAACCG GCCGAGU AGUUUG   UAU        A
     C  -  ---UC       A  -UA  U         U       U      ---   AUAUUUAU
Stem-loop sequence CUUGUUGUAUGUAUAAUGAAAGGCGCCACUGCGGUAUUGGCCCGGUUCACUCAGACACAGCUCGCUAGCGCAUAUUUAUAUAUGUUUGAUUGAGCCGUGCCAAUAUCUCAAUGCACCUUUCACUCGAUCGCAAG

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).