ncRNA ID | lus-miR171a |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - AGAUUGAGCCGCGCCAAUAUC - NA |
Stem-loop(if miRNA) |
      C          G         C  UAA  GAU      AUCAAAAU       AACAGCUCUAUAC   UU GAAAGG GAUAUUGGUG GGUUCAAUC GA   CG   UUUUAC        UAACAGC             CCA  C |||||| |||||||||| ||||||||| ||   ||   ||||||        |||||||             |||  A CUUUUC CUAUAACCGC CCGAGUUAG CU   GC   AAAAUG        AUUGUUG             GGU  U       A          G         A  CUA  -AU      -AUAUUAU       -----------GU   UC |
Stem-loop sequence | GAAAGGCGAUAUUGGUGGGGUUCAAUCCGAUAACGGAUUUUUACAUCAAAAUUAACAGCAACAGCUCUAUACCCAUUCAUCUUGGUGGUUGUUAUAUUAUAGUAAAAUACGAUCUCAGAUUGAGCCGCGCCAAUAUCACUUUUC |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |