ncRNA ID | novel_vvi_miR182 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr14:3011156-3011263 [-] |
Reference genome | 12X |
Source | SRR1049371;SRR1049296 |
Length | 22 |
Mature sequence(if miRNA) | 87 - AGAGCUGGAGGGAAAUGAGUGA - 108 |
Stem-loop(if miRNA) |
--      G A               AAA                 U  UUU  C   AGAGCU G GGGAAAUGAGUGAAA   UUGGAAUCUCGGAGUAG CC   GA A   |||||| | |||||||||||||||   ||||||||||||||||| ||   ||   UUUUGG C CCCUUUGCUUACUUU   AGCCUUAGAGUCUUGUC GG   CU G UC      A -               CGA                 C  -UC  U |
Stem-loop sequence | AGAGCUGGAGGGAAAUGAGUGAAAAAAUUGGAAUCUCGGAGUAGUCCUUUGACAGUUCCUGGCCUGUUCUGAGAUUCCGAAGCUUUCAUUCGUUUCCCCAGGUUUUCU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA167381.1 |
|
3.0 | TSA: Vitis vinifera Locus_6687_Transcript_6/10_Confidence_0.385.Vivi mRNA sequence | NA | coding protein | psRNATarget | |||||||||
KA167382.1 |
|
3.0 | TSA: Vitis vinifera Locus_6687_Transcript_3/10_Confidence_0.385.Vivi mRNA sequence | NA | coding protein | psRNATarget |