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BaseInfo

ncRNA ID novel_vvi_miR179
Species Vitis vinifera
Class miRNA
Genome position Chr13:14763781-14763858 [-]
Reference genome 12X
Source SRR1049371
Length 21
Mature sequence(if miRNA) 1 - GUGACUACGACUUUGACUACU - 21
Stem-loop(if miRNA) --                         C GU   AGA  U
  UAGUCAAAGUCGUAGUCACCAACUA G  UUU   AU A
  ||||||||||||||||||||||||| |  |||   ||
  AUCAGUUUCAGCAUCAGUGGUUGAU C  AAA   UG A
UC                         A UG   --G  A
Stem-loop sequence UAGUCAAAGUCGUAGUCACCAACUACGGUUUUAGAAUUAAAGUGAAAGUCAUAGUUGGUGACUACGACUUUGACUACU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_019218370.1
ncRNA:21   UCAUCAGUUUCAGCAUCAGUG   1
  **||*|||||||||*||||||
targets:81   CAUACUCAAAGUCGAAGUCAC   101

2.5 PREDICTED: Vitis vinifera uncharacterized mitochondrial protein AtMg00530-like (LOC109121432), partial mRNA NA coding protein psRNATarget