ncRNA ID | novel_vvi_miR177 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr13:22937428-22937481 [+] |
Reference genome | 12X |
Source | SRR1049371;SRR1528359;SRR1048205 |
Length | 24 |
Mature sequence(if miRNA) | 31 - AUAGUCAAAGCCGUAGUCACCAAC - 54 |
Stem-loop(if miRNA) |
--           A            U   UGGUGACUACG CUUUGACUGUUU U   ||||||||||| ||||||||||||   ACCACUGAUGC GAAACUGAUAAA A CA           C            A |
Stem-loop sequence | UGGUGACUACGACUUUGACUGUUUUUAAAAAUAGUCAAAGCCGUAGUCACCAAC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010658998.2 |
|
1.5 | PREDICTED: Vitis vinifera mucin-5AC-like (LOC104880885), transcript variant X2, mRNA | NA | coding protein | psRNATarget |