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BaseInfo

ncRNA ID	novel_vvi_miR171
Species	Vitis vinifera
Class	miRNA
Genome position	Chr12:18735023-18735203 [+]
Reference genome	12X
Source	SRR1049371
Length	21
Mature sequence(if miRNA)	1 - UCACAUUCCUCGUACCCUUGU - 21
Stem-loop(if miRNA)	--        C          G G         GUA      ---A      --     CC         U  ACCACCUUCUA   GUAACGA   UCACAUUC UCGUACCCUU U AAUUUUUUA   UUUUUG    UUUGGA  UUUUU  GGAUAUCAU UG           UGU       A   |||||||| |||||||||| | |||||||||   ||||||    ||||||  |||||  ||||||||| ||           |||       C   AGUGUAAG AGCAUGGGAG G UUAAGAGGU   AGAAAC    AAACUU  AAAAA  CCUGUAGUA AC           ACA       C GA        A          G -         -GG      CUCA      UA     AC         U  -CAAACCUACA   AAUUUAU
Stem-loop sequence	UCACAUUCCUCGUACCCUUGUGAAUUUUUUAGUAUUUUUGAUUUGGAUUUUUCCGGAUAUCAUUUGACCACCUUCUAUGUGUAACGAACCUAUUUAAACAACAUCCAAACCAUAUGAUGUCCCAAAAAAAUUUCAAAACUCCAAAGAGGUGGAGAAUUGGGAGGGUACGAAGAAUGUGAAG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
FQ395742.1	ncRNA:21   UGUUCCCAUGCUCCUUACACU   1   =*|||||*||||*|||||||| targets:1000   GAAAGGGCACGAAGAAUGUGA   1020 Target Full Sequence	2.5	Vitis vinifera clone SS0AFA14YF07	NA	coding protein	psRNATarget