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BaseInfo

ncRNA ID novel_vvi_miR168
Species Vitis vinifera
Class miRNA
Genome position Chr9:22018164-22018222 [-]
Reference genome 12X
Source SRR1049371;SRR1528358;SRR1049291
Length 24
Mature sequence(if miRNA) 36 - UCCCAUCACUUAUCCUAUCCUAUG - 59
Stem-loop(if miRNA) --   C       A        U      A
  UCC AUCACUU UCCUAUCC AUGUUU A
  ||| ||||||| |||||||| ||||||
  AGG UGGUGAA AGGAUAGG UAUAAA C
AU   A       A        -      C
Stem-loop sequence UCCCAUCACUUAUCCUAUCCUAUGUUUAACCAAAUAUGGAUAGGAAAAGUGGUAGGAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KA153571.1
ncRNA:24   GUAUCCUAUCCUAUUCACUACCCU   1
  |||=*|||||||||||||||*|||
targets:170   CAUGUGAUAGGAUAAGUGAUAGGA   193

1.5 TSA: Vitis vinifera Locus_69959_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence NA coding protein psRNATarget