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BaseInfo

ncRNA ID novel_vvi_miR164
Species Vitis vinifera
Class miRNA
Genome position Chr7:9677486-9677692 [-]
Reference genome 12X
Source SRR1049371;SRR1049373;SRR1049291;SRR1049293
Length 24
Mature sequence(if miRNA) 184 - AACUUAUACUAAAGGUGUCUCUUA - 207
Stem-loop(if miRNA) --AAC                    A          -   CAA     C        G                G      AUUGAAU     C            U
     UUAUACUAAAGGUGUCUCUU AAGAGACACC UUC   AAUUU ACAAAAUU AAUUUAUAUUAAAGGU UCUCUU       UUAUA UAAAGGUGUUUC U
     |||||||||||||||||||| |||||||||| |||   ||||| |||||||| |||||||||||||||| ||||||       ||||| |||||||||||| C
     AAUAUGAUUUUCACAGAGAA UUCUUUGUGG AAG   UUAAG UGUUUUAG UUAAAUAUGAUUUCCA AGAGAA       AAUAU AUUUCCACAGAG A
ACUUA                    G          G   AUA     U        G                A      -------     A            A
Stem-loop sequence AACUUAUACUAAAGGUGUCUCUUAAAGAGACACCUUCCAAAAUUUCACAAAAUUGAAUUUAUAUUAAAGGUGUCUCUUAUUGAAUUUAUACUAAAGGUGUUUCUUCAAGAGACACCUUUAAUAUAAAAGAGAAACCUUUAGUAUAAAUUGGAUUUUGUUGAAUUAUAGAAGGGUGUUUCUUGAAGAGACACUUUUAGUAUAAAUUCA