ncRNA ID | novel_vvi_miR164 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr7:9677486-9677692 [-] |
Reference genome | 12X |
Source | SRR1049371;SRR1049373;SRR1049291;SRR1049293 |
Length | 24 |
Mature sequence(if miRNA) | 184 - AACUUAUACUAAAGGUGUCUCUUA - 207 |
Stem-loop(if miRNA) |
--AAC                    A          -   CAA     C        G                G      AUUGAAU     C            U      UUAUACUAAAGGUGUCUCUU AAGAGACACC UUC   AAUUU ACAAAAUU AAUUUAUAUUAAAGGU UCUCUU       UUAUA UAAAGGUGUUUC U      |||||||||||||||||||| |||||||||| |||   ||||| |||||||| |||||||||||||||| ||||||       ||||| |||||||||||| C      AAUAUGAUUUUCACAGAGAA UUCUUUGUGG AAG   UUAAG UGUUUUAG UUAAAUAUGAUUUCCA AGAGAA       AAUAU AUUUCCACAGAG A ACUUA                    G          G   AUA     U        G                A      -------     A            A |
Stem-loop sequence | AACUUAUACUAAAGGUGUCUCUUAAAGAGACACCUUCCAAAAUUUCACAAAAUUGAAUUUAUAUUAAAGGUGUCUCUUAUUGAAUUUAUACUAAAGGUGUUUCUUCAAGAGACACCUUUAAUAUAAAAGAGAAACCUUUAGUAUAAAUUGGAUUUUGUUGAAUUAUAGAAGGGUGUUUCUUGAAGAGACACUUUUAGUAUAAAUUCA |