Search result

BaseInfo

ncRNA ID novel_vvi_miR163
Species Vitis vinifera
Class miRNA
Genome position Chr7:17489828-17489887 [-]
Reference genome 12X
Source SRR1049371;SRR1049291
Length 24
Mature sequence(if miRNA) 37 - UCCCAUCACUUAUCCUAUCCUAUG - 60
Stem-loop(if miRNA) --   C          C    C      CG
  UCC AUCACUUAUC UAUC UAUGUU  A
  ||| |||||||||| |||| ||||||
  AGG UAGUGAAUAG AUAG GUACAA  C
AU   A          U    A      AC
Stem-loop sequence UCCCAUCACUUAUCCUAUCCUAUGUUCGACCAAACAUGAGAUAUGAUAAGUGAUAGGAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KA153571.1
ncRNA:24   GUAUCCUAUCCUAUUCACUACCCU   1
  |||=*|||||||||||||||*|||
targets:170   CAUGUGAUAGGAUAAGUGAUAGGA   193

1.5 TSA: Vitis vinifera Locus_69959_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence NA coding protein psRNATarget