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BaseInfo

ncRNA ID novel_vvi_miR161
Species Vitis vinifera
Class miRNA
Genome position Chr9:9586076-9586288 [-]
Reference genome 12X
Source SRR1048203
Length 24
Mature sequence(if miRNA) 1 - CUAUUCAGCUAAAAAACAAACACC - 24
Stem-loop(if miRNA) --C            A             GU          A                          AUAUUAA      CC  C    C    A         U
   GUUUGUUUUUUG CUGAAUAGAAAAA  CAAAUAUUUU GUUUUUUCUAUUCAGUUAAAAGUAAC       CAUCAU  AA AUAG UAAA UGAACUUAU A
   |||||||||||| |||||||||||||  |||||||||| ||||||||||||||||||||||||||       ||||||  || |||| |||| ||||||||| U
   CAAACAAAAAAU GACUUAUCUUUUU  GUUUAUAAAA CGAAAAAGAUAAGUCAAUUUUCAUUG       GUAGUA  UU UAUU AUUU ACUUGAAUA C
CCA            C             UG          C                          AAAAACA      AA  A    A    G         A
Stem-loop sequence CGUUUGUUUUUUGACUGAAUAGAAAAAGUCAAAUAUUUUAGUUUUUUCUAUUCAGUUAAAAGUAACAUAUUAACAUCAUCCAACAUAGCUAAAAUGAACUUAUUAUCAAUAAGUUCAGUUUAAUUAUAUUAAAUGAUGACAAAAAGUUACUUUUAACUGAAUAGAAAAAGCCAAAAUAUUUGGUUUUUUCUAUUCAGCUAAAAAACAAACACC