ncRNA ID | novel_vvi_miR161 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr9:9586076-9586288 [-] |
Reference genome | 12X |
Source | SRR1048203 |
Length | 24 |
Mature sequence(if miRNA) | 1 - CUAUUCAGCUAAAAAACAAACACC - 24 |
Stem-loop(if miRNA) |
--C            A             GU          A                          AUAUUAA      CC  C    C    A         U    GUUUGUUUUUUG CUGAAUAGAAAAA  CAAAUAUUUU GUUUUUUCUAUUCAGUUAAAAGUAAC       CAUCAU  AA AUAG UAAA UGAACUUAU A    |||||||||||| |||||||||||||  |||||||||| ||||||||||||||||||||||||||       ||||||  || |||| |||| ||||||||| U    CAAACAAAAAAU GACUUAUCUUUUU  GUUUAUAAAA CGAAAAAGAUAAGUCAAUUUUCAUUG       GUAGUA  UU UAUU AUUU ACUUGAAUA C CCA            C             UG          C                          AAAAACA      AA  A    A    G         A |
Stem-loop sequence | CGUUUGUUUUUUGACUGAAUAGAAAAAGUCAAAUAUUUUAGUUUUUUCUAUUCAGUUAAAAGUAACAUAUUAACAUCAUCCAACAUAGCUAAAAUGAACUUAUUAUCAAUAAGUUCAGUUUAAUUAUAUUAAAUGAUGACAAAAAGUUACUUUUAACUGAAUAGAAAAAGCCAAAAUAUUUGGUUUUUUCUAUUCAGCUAAAAAACAAACACC |