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BaseInfo

ncRNA ID	novel_vvi_miR160
Species	Vitis vinifera
Class	miRNA
Genome position	Chr10:3022211-3022359 [-]
Reference genome	12X
Source	SRR1049371;SRR1048203;SRR1049296
Length	24
Mature sequence(if miRNA)	126 - UUUAUCAUCAUUUUUAUCACUUGC - 149
Stem-loop(if miRNA)	--                                        CAU    A     C   -    AA        UU   UUUAUCAUCAUUUUUAUCACUUGCUGAUGUGGUAAGUGAU   UAGU GUAGA AAA UAAU  AAAAUGCA  U   ||||||||||||||||||||||||||||||||||||||||   |||| ||||| ||| ||||  ||||||||   AGAUAGUGGUAAAAGUAGUGAAUGAUUACACCAUUUAUUG   AUUA CAUCU UUU AUUA  UUUUACGU  U AA                                        -CU    C     U   C    -G        UA
Stem-loop sequence	UUUAUCAUCAUUUUUAUCACUUGCUGAUGUGGUAAGUGAUCAUUAGUAGUAGACAAAUAAUAAAAAAUGCAUUUUAUUGCAUUUUGAUUACUUUUUCUACCAUUAUCGUUAUUUACCACAUUAGUAAGUGAUGAAAAUGGUGAUAGAAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_010664071.2	ncRNA:24   CGU-UCACUAUUUUUACUACUAUUU   1   *||-|||||||=|||*||||||||| targets:1293   UCAUAGUGAUAGAAAAGAUGAUAAA   1317 Target Full Sequence	2.5	PREDICTED: Vitis vinifera uncharacterized LOC100256698 (LOC100256698), mRNA	NA	coding protein	psRNATarget
XM_002279019.4	ncRNA:24   CGUUCACUAUUUUUACUACUAUUU   1   *|||*|*||=|||||||||||||* targets:210   UCAAAUAAUGAAAAUGAUGAUAAC   233 Target Full Sequence	3.0	PREDICTED: Vitis vinifera uncharacterized LOC100263805 (LOC100263805), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_010652595.2	ncRNA:24   CGUUCACUAUUUUUACUACUAUUU   1   *|||*|*||=|||||||||||||* targets:219   UCAAAUAAUGAAAAUGAUGAUAAC   242 Target Full Sequence	3.0	PREDICTED: Vitis vinifera uncharacterized LOC100263805 (LOC100263805), transcript variant X2, mRNA	NA	coding protein	psRNATarget