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BaseInfo

ncRNA ID novel_vvi_miR159
Species Vitis vinifera
Class miRNA
Genome position Chr3:18497692-18497745 [+]
Reference genome 12X
Source SRR1049371;SRR1049373;SRR1528359;SRR1048206
Length 24
Mature sequence(if miRNA) 31 - AUAGUCAAAGCCGUAGUCACCAAC - 54
Stem-loop(if miRNA) --                        U
  UGGUGACUACGGCUUUGAUUGUUU U
  ||||||||||||||||||||||||
  ACCACUGAUGCCGAAACUGAUAAA A
CA                        A
Stem-loop sequence UGGUGACUACGGCUUUGAUUGUUUUUAAAAAUAGUCAAAGCCGUAGUCACCAAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_010658998.2
ncRNA:24   CAACCACUGAUGCCGAAACUGAUA   1
  ||||||||||||||||||||=|||
targets:3   GUUGGUGACUACGGCUUUGAUUAU   26

1.5 PREDICTED: Vitis vinifera mucin-5AC-like (LOC104880885), transcript variant X2, mRNA NA coding protein psRNATarget