ncRNA ID | lus-miR169j |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - CAGCCAAGGAUGACUUGCCGG - NA |
Stem-loop(if miRNA) |
        ----   C    U    A  UG   A  C  UG  UC                   -G    CAUCCUGCUCCGAUCCG GAGAGCAU    AGG CUGA AUGA GA  GAG GA CG  GU  AGCCAAGGAUGACUUGCCG  GCGG                 G ||||||||    ||| |||| |||| ||  ||| || ||  ||  |||||||||||||||||||  |||| CUCUUGUA    UCC GACU UACU CU  UUC CU GC  UA  UCGGUUCUUAUUGAACGGC  CUAG                 U         UCUC   A    U    -  UG   A  C  GU  CA                   UC    CUCGGCUCUUACUAGCC |
Stem-loop sequence | GAGAGCAUAGGCCUGAUAUGAAGAUGGAGAGACCGUGGUUCAGCCAAGGAUGACUUGCCGGGCGGCAUCCUGCUCCGAUCCGGUCCGAUCAUUCUCGGCUCGAUCCUCGGCAAGUUAUUCUUGGCUACAUUGCGCUCACUUGUUCUCAUUUCAGACCUCUCUAUGUUCUC |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |