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BaseInfo

ncRNA ID lus-miR169j
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - CAGCCAAGGAUGACUUGCCGG - NA
Stem-loop(if miRNA)         ----   C    U    A  UG   A  C  UG  UC                   -G    CAUCCUGCUCCGAUCCG
GAGAGCAU    AGG CUGA AUGA GA  GAG GA CG  GU  AGCCAAGGAUGACUUGCCG  GCGG                 G
||||||||    ||| |||| |||| ||  ||| || ||  ||  |||||||||||||||||||  ||||
CUCUUGUA    UCC GACU UACU CU  UUC CU GC  UA  UCGGUUCUUAUUGAACGGC  CUAG                 U
        UCUC   A    U    -  UG   A  C  GU  CA                   UC    CUCGGCUCUUACUAGCC
Stem-loop sequence GAGAGCAUAGGCCUGAUAUGAAGAUGGAGAGACCGUGGUUCAGCCAAGGAUGACUUGCCGGGCGGCAUCCUGCUCCGAUCCGGUCCGAUCAUUCUCGGCUCGAUCCUCGGCAAGUUAUUCUUGGCUACAUUGCGCUCACUUGUUCUCAUUUCAGACCUCUCUAUGUUCUC

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).