Search result

BaseInfo

ncRNA ID novel_vvi_miR152
Species Vitis vinifera
Class miRNA
Genome position Chr17:13925238-13925297 [-]
Reference genome 12X
Source SRR1049371;SRR1049291
Length 24
Mature sequence(if miRNA) 37 - UCCCAUCACUUAUCCUAUCCUAUG - 60
Stem-loop(if miRNA) --  C                       CA
  UC CAUCACUUAUCCUAUCCUAUGUU  A
  || |||||||||||||||||||||||
  AG GUGGUGAAUAGGAUAGGGUACAA  C
AU  C                       AU
Stem-loop sequence UCCCAUCACUUAUCCUAUCCUAUGUUCAACUAAACAUGGGAUAGGAUAAGUGGUGCGAUA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KA153571.1
ncRNA:24   GUAUCCUAUCCUAUUCACUACCCU   1
  |||=*|||||||||||||||*|||
targets:170   CAUGUGAUAGGAUAAGUGAUAGGA   193

1.5 TSA: Vitis vinifera Locus_69959_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence NA coding protein psRNATarget