ncRNA ID | novel_vvi_miR150 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr15:10263376-10263440 [+] |
Reference genome | 12X |
Source | SRR1049371 |
Length | 24 |
Mature sequence(if miRNA) | 42 - CAAUUUAAUUAUAUUGGAUGAUGU - 65 |
Stem-loop(if miRNA) |
--         C    C    A         U   AUCAUCCAA AUAG UAAA UGAACUUGU A   ||||||||| |||| |||| ||||||||| U   UAGUAGGUU UAUU AUUU ACUUGAAUA C UG         A    A    A         A |
Stem-loop sequence | AUCAUCCAACAUAGCUAAAAUGAACUUGUUAUCAAUAAGUUCAAUUUAAUUAUAUUGGAUGAUGU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_002275318.4 |
|
0.0 | PREDICTED: Vitis vinifera tRNA pseudouridine synthase A (LOC100242086), mRNA | NA | coding protein | psRNATarget |