ncRNA ID | novel_vvi_miR149 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr15:5311404-5311483 [-] |
Reference genome | 12X |
Source | SRR1049371;SRR1049373;SRR1528359;SRR1048206;SRR1528386 |
Length | 24 |
Mature sequence(if miRNA) | 57 - AUAGUCAAAGCCGUAGUCACCAAC - 80 |
Stem-loop(if miRNA) |
--AUA                 C              ACU      GUCAAAGCCGUAGUCAC AACUACGGUUUUAA   U      ||||||||||||||||| ||||||||||||||      CAGUUUUGGCAUUAGUG UUGGUGCCAAAAUU   A UUUAC                 U              GAA |
Stem-loop sequence | AUAGUCAAAGCCGUAGUCACCAACUACGGUUUUAAACUUAAAGUUAAAACCGUGGUUUGUGAUUACGGUUUUGACCAUUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010658998.2 |
|
1.5 | PREDICTED: Vitis vinifera mucin-5AC-like (LOC104880885), transcript variant X2, mRNA | NA | coding protein | psRNATarget |