ncRNA ID | novel_vvi_miR148 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr15:10234021-10234116 [-] |
Reference genome | 12X |
Source | SRR1049371 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GUUUGAGUGAGUAUUUGUUAAAAG - 24 |
Stem-loop(if miRNA) |
--UGA    U       A      UACAA   --GU       AAUUAAAC      AACA GUACUCA UCAAAC     GAU    UUAUACG        C      |||| ||||||| ||||||     |||    |||||||        A      UUGU UAUGAGU AGUUUG     CUA    GGUGUGC        A GAAAA    U       G      -----   AUAU       ACAAACCU |
Stem-loop sequence | UGAAACAUGUACUCAAUCAAACUACAAGAUGUUUAUACGAAUUAAACCAAUCCAAACACGUGUGGUAUAAUCGUUUGAGUGAGUAUUUGUUAAAAG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_010667074.2 |
|
1.0 | PREDICTED: Vitis vinifera probable L-type lectin-domain containing receptor kinase S.5-like (LOC100246555), mRNA | NA | coding protein | psRNATarget |