ncRNA ID | novel_vvi_miR147 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr15:2387902-2388029 [+] |
Reference genome | 12X |
Source | SRR1049371;SRR1048205;SRR1048206;SRR1048208;SRR1528401;SRR1048203;SRR1049294;SRR1049296 |
Length | 24 |
Mature sequence(if miRNA) | 105 - GACUGAUUGAUAUAGGUGCGGUCC - 128 |
Stem-loop(if miRNA) |
--    -        G   G     CGAC   AA  ---------------AAA  CAAACUGAUAGAAAAAUG   ACCG AUCUAUAU GGU CGGUC    UCA  CU                  CA                  G   |||| |||||||| ||| |||||    |||  ||                  ||   UGGC UGGAUAUA UUA GUCAG    AGU  GA                  CC                  C CC    G        G   -     ---U   AG  CAGUCAAGCUCAAAAACC  GGCGUGGGUAUAGCUAGC |
Stem-loop sequence | ACCGAUCUAUAUGGGUGCGGUCCGACUCAAACUAAACACAAACUGAUAGAAAAAUGGCCGAUCGAUAUGGGUGCGGCCCCAAAAACUCGAACUGACAGGAUGAUGACUGAUUGAUAUAGGUGCGGUCC |