Search result

BaseInfo

ncRNA ID lus-miR169i
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UGAGCCAAGGAUGACUUGCCG - NA
Stem-loop(if miRNA)     --     U GA  U     ----    A        U    CU          UG    G  -   GCUGAAAC     UU CAUGCUUUGCUUUCU
GUGG  GGUAG G  UU CAUGG    UGGG UGGGGGAG AGGU  GAGCCAAGGA  ACUU CC GCC        CACAA  G               U
||||  ||||| |  || |||||    |||| |||||||| ||||  ||||||||||  |||| || |||        |||||  |
CACC  CCAUU C  AA GUACC    AUCC GCUCCCUC UUCG  CUCGGUUCCU  UGAA GG CGG        GGUUU  G               G
    UA     U AG  U     UUUU    -        C    AU          GU    G  U   -GUUACCU     -C UAUGUCAAACCCUGU
Stem-loop sequence GUGGGGUAGUGGAUUUCAUGGUGGGAUGGGGGAGUAGGUCUGAGCCAAGGAUGACUUGCCGCCGCUGAAACCACAAUUGCAUGCUUUGCUUUCUUGUGUCCCAAACUGUAUGCUUUGGUCCAUUGGGCUGGGAAGUUGUCCUUGGCUCUAGCUUCCUCCCUCGCCUAUUUUCCAUGUAAGACUUUACCAUCCAC

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).