ncRNA ID | novel_vvi_miR144 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr13:2577678-2577736 [-] |
Reference genome | 12X |
Source | SRR1049370 |
Length | 24 |
Mature sequence(if miRNA) | 36 - AUCCAACAUAACUAAACUGAACCU - 59 |
Stem-loop(if miRNA) |
--                C     C   U   AUCCAACAUAACUAAA UGAAC UAU G   |||||||||||||||| ||||| ||| A   UAGGUUGUAUUGAUUU ACUUG AUA U AG                C     A   A |
Stem-loop sequence | AUCCAACAUAACUAAACUGAACCUAUUGAUAAUAAGUUCACUUUAGUUAUGUUGGAUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA161886.1 |
|
1.5 | TSA: Vitis vinifera Locus_14723_Transcript_3/3_Confidence_0.750.Vivi mRNA sequence | NA | coding protein | psRNATarget |