ncRNA ID | novel_vvi_miR140 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr12:936424-936482 [+] |
Reference genome | 12X |
Source | SRR1049370;SRR1528365 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AUCCAACAUAACUAAACUGAACCU - 24 |
Stem-loop(if miRNA) |
--      C   A     C     CUA   A   AUCCAA AUA CUAAA UGAAC   UUG U   |||||| ||| ||||| |||||   |||   UAGGUU UAU GAUUU ACUUG   AAC A AG      A   C     U     ---   A |
Stem-loop sequence | AUCCAACAUAACUAAACUGAACCUAUUGAUAACAAGUUCAUUUUAGCUAUAUUGGAUGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA161886.1 |
|
1.5 | TSA: Vitis vinifera Locus_14723_Transcript_3/3_Confidence_0.750.Vivi mRNA sequence | NA | coding protein | psRNATarget |