ncRNA ID | novel_vvi_miR136 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr11:19800794-19800883 [-] |
Reference genome | 12X |
Source | SRR1049370 |
Length | 21 |
Mature sequence(if miRNA) | 1 - GCAUGAUAUGUACUUUGGUGC - 21 |
Stem-loop(if miRNA) |
--                         A         U    AAA   ACCAAAGUACAUAUCAUGCUCUUUA GACUCCAAA UGCA   C   ||||||||||||||||||||||||| ||||||||| ||||   UGGUUUCAUGUAUAGUACGAGAAAU CUGAGGUUU ACGU   A CG                         C         U    AAC |
Stem-loop sequence | ACCAAAGUACAUAUCAUGCUCUUUAAGACUCCAAAUUGCAAAACACAAUGCAUUUUGGAGUCCUAAAGAGCAUGAUAUGUACUUUGGUGC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA136941.1 |
|
3.0 | TSA: Vitis vinifera Locus_193_Transcript_8/10_Confidence_0.414.Vivi mRNA sequence | NA | coding protein | psRNATarget |