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BaseInfo

ncRNA ID lus-miR169h
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - CAGCCAAGGAUGACUUGCCGG - NA
Stem-loop(if miRNA)          UGCUU     U U   U      U  CCAAA  C    AA                   CGCCU    CUGCU   UUUCUCGUUAUGUUUUUUCUU
CAUCGUAGA     GCAUG G GAA AAGGGA GU     AG AGCC  GGAUGACUUGCCGGCUGGC     CAGC     GCA                     U
|||||||||     ||||| | ||| |||||| ||     || ||||  |||||||||||||||||||     ||||     |||                     C
GUAGCAUUU     CGUAC C CUU UUCCCU CA     UC UCGG  UCUGCUGAACGGCCGGCCG     GUCG     AAA                     A
         UACAU     U U   C      -  ---UC  A    GC                   -AAAU    -----   UCAUCCUUUUUUUACUUUACC
Stem-loop sequence CAUCGUAGAUGCUUGCAUGUGUGAAUAAGGGAUGUCCAAAAGCAGCCAAGGAUGACUUGCCGGCUGGCCGCCUCAGCCUGCUGCAUUUCUCGUUAUGUUUUUUCUUUCACCAUUUCAUUUUUUUCCUACUAAAGCUGUAAAGCCGGCCGGCAAGUCGUCUCGGGCUACUCUACUCCCUUCUUCUCUCAUGCUACAUUUUACGAUG

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).