ncRNA ID | lus-miR169h |
Species | Linum usitatissimum |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | miRBase |
Length | 21 |
Mature sequence(if miRNA) | NA - CAGCCAAGGAUGACUUGCCGG - NA |
Stem-loop(if miRNA) |
         UGCUU     U U   U      U  CCAAA  C    AA                   CGCCU    CUGCU   UUUCUCGUUAUGUUUUUUCUU CAUCGUAGA     GCAUG G GAA AAGGGA GU     AG AGCC  GGAUGACUUGCCGGCUGGC     CAGC     GCA                     U |||||||||     ||||| | ||| |||||| ||     || ||||  |||||||||||||||||||     ||||     |||                     C GUAGCAUUU     CGUAC C CUU UUCCCU CA     UC UCGG  UCUGCUGAACGGCCGGCCG     GUCG     AAA                     A          UACAU     U U   C      -  ---UC  A    GC                   -AAAU    -----   UCAUCCUUUUUUUACUUUACC |
Stem-loop sequence | CAUCGUAGAUGCUUGCAUGUGUGAAUAAGGGAUGUCCAAAAGCAGCCAAGGAUGACUUGCCGGCUGGCCGCCUCAGCCUGCUGCAUUUCUCGUUAUGUUUUUUCUUUCACCAUUUCAUUUUUUUCCUACUAAAGCUGUAAAGCCGGCCGGCAAGUCGUCUCGGGCUACUCUACUCCCUUCUUCUCUCAUGCUACAUUUUACGAUG |
1 | PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes"; Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY; Planta. 237:1149-1161(2013). |