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BaseInfo

ncRNA ID novel_vvi_miR124
Species Vitis vinifera
Class miRNA
Genome position Chr19:6503082-6503140 [+]
Reference genome 12X
Source SRR1049370;SRR1528365
Length 24
Mature sequence(if miRNA) 1 - AUCCAACAUAACUAAACUGAACCU - 24
Stem-loop(if miRNA) --                C    CC   U
  AUCCAACAUAACUAAA UGAA  UAU G
  |||||||||||||||| ||||  ||| A
  UAGGUUGUAUUGAUUU ACUU  AUA U
AG                C    AA   A
Stem-loop sequence AUCCAACAUAACUAAACUGAACCUAUUGAUAAUAAAUUCACUUUAGUUAUGUUGGAUGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KA161886.1
ncRNA:24   UCCAAGUCAAAUCAAUACAACCUA   1
  |||||||||||||||||*||||||
targets:262   AGGUUCAGUUUAGUUAUAUUGGAU   285

1.5 TSA: Vitis vinifera Locus_14723_Transcript_3/3_Confidence_0.750.Vivi mRNA sequence NA coding protein psRNATarget