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BaseInfo

ncRNA ID	novel_vvi_miR123
Species	Vitis vinifera
Class	miRNA
Genome position	Chr18:13496741-13496849 [+]
Reference genome	12X
Source	SRR1049370
Length	24
Mature sequence(if miRNA)	86 - CUUCCUAAAAUUACUAUCAAACGC - 109
Stem-loop(if miRNA)	--    A            A          U       U  A  C     AGAU   GUUU AUAGUGAUUUUA GAAGUGUUUG AAUCUUU UA CA UUGAA    A   |||| |||||||||||| |||||||||| ||||||| || || |||||    A   CAAA UAUCAUUAAAAU CUUCACGAAU UUAGAAA AU GU AAUUU    A CG    C            C          U       U  C  A     AAAA
Stem-loop sequence	GUUUAAUAGUGAUUUUAAGAAGUGUUUGUAAUCUUUUUAACACUUGAAAGAUAAAAAAAUUUAAAUGCUAUAAAGAUUUUAAGCACUUCCUAAAAUUACUAUCAAACGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_010651876.2	ncRNA:24   CGCAAACUAUCAUUAAAAUCCUUC   1   *|*|||||||||||||||*||||| targets:1475   CCAUUUGAUAGUAAUUUUUGGAAG   1498 Target Full Sequence	1.5	PREDICTED: Vitis vinifera probable folate-biopterin transporter 8, chloroplastic (LOC100249433), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010651877.2	ncRNA:24   CGCAAACUAUCAUUAAAAUCCUUC   1   *|*|||||||||||||||*||||| targets:1502   CCAUUUGAUAGUAAUUUUUGGAAG   1525 Target Full Sequence	1.5	PREDICTED: Vitis vinifera probable folate-biopterin transporter 8, chloroplastic (LOC100249433), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_002282448.3	ncRNA:24   CGCAAACUAUCAUUAAAAUCCUUC   1   *|*|||||||||||||||*||||| targets:2485   CCAUUUGAUAGUAAUUUUUGGAAG   2508 Target Full Sequence	1.5	PREDICTED: Vitis vinifera probable folate-biopterin transporter 8, chloroplastic (LOC100249433), transcript variant X1, mRNA	NA	coding protein	psRNATarget
KA167864.1	ncRNA:24   CGCAAACUAUCAUUAAAAUCCUUC   1   *||||||=||||=||||||||||| targets:817   CCGUUUGGUAGUGAUUUUAGGAAG   840 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_16159_Transcript_7/7_Confidence_0.526.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA167862.1	ncRNA:24   CGCAAACUAUCAUUAAAAUCCUUC   1   *||||||=||||=||||||||||| targets:2004   CCGUUUGGUAGUGAUUUUAGGAAG   2027 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_16159_Transcript_5/7_Confidence_0.632.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA167863.1	ncRNA:24   CGCAAACUAUCAUUAAAAUCCUUC   1   *||||||=||||=||||||||||| targets:2086   CCGUUUGGUAGUGAUUUUAGGAAG   2109 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_16159_Transcript_6/7_Confidence_0.526.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA159796.1	ncRNA:24   CGCAAACUAUCAUUAAAAUCCUUC   1   ||||||||*|||=||||||||||| targets:2585   GCGUUUGACAGUGAUUUUAGGAAG   2608 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_3174_Transcript_7/8_Confidence_0.565.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA170094.1	ncRNA:24   CGCAAACUAUCAUUAAAAUCCUUC   1   ||*||||=||||=||||||||||| targets:4075   GCAUUUGGUAGUGAUUUUAGGAAG   4098 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_1667_Transcript_4/5_Confidence_0.583.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA153859.1	ncRNA:24   CGCAAACUAUCAUUAAAAUCCUUC   1   *=|*|||=|||||||||||*|||| targets:164   CUGCUUGGUAGUAAUUUUAAGAAG   187 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_29344_Transcript_1/2_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget