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BaseInfo

ncRNA ID	novel_vvi_miR119
Species	Vitis vinifera
Class	miRNA
Genome position	Chr17:6385527-6385739 [-]
Reference genome	12X
Source	SRR1049370;SRR1049296
Length	24
Mature sequence(if miRNA)	1 - CUAUUCAACUAAAAAACAAACACC - 24
Stem-loop(if miRNA)	--              C      A                  U     C     A            C     A     A  C   A   C    G     U   U   UGUUUGUUUUUUGG UGAAUA AAAAAAUCAAAAUAUUUG CUUUU UUAUU AGCUAAAAGUAA CUGUU ACAUC UC AAU UAA UAAA UGAAC UGU A   |||||||||||||| |||||| |||||||||||||||||| ||||| ||||| |||||||||||| ||||| ||||| || ||| ||| |||| ||||| ||| U   ACAAACAAAAAAUC ACUUAU UUUUUUGGUUUUAUAAAC GAAAA AAUAA UUGAUUUUCAUU GACAA UGUAG AG UUA AUU AUUU ACUUG AUA C CC              A      C                  U     A     G            U     C     C  A   C   C    G     U   A
Stem-loop sequence	UGUUUGUUUUUUGGCUGAAUAAAAAAAAUCAAAAUAUUUGUCUUUUCUUAUUAAGCUAAAAGUAACCUGUUAACAUCAUCCAAUAUAACUAAAGUGAACUUGUUAUCAAUAUGUUCAGUUUACUUACAUUAGACGAUGUCAACAGUUUACUUUUAGUUGAAUAAAAAAAGUCAAAUAUUUUGGUUUUUUCUAUUCAACUAAAAAACAAACACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA167155.1	ncRNA:24   CCACAAACAAAAAAUCAACUUAUC   1   ||||||||||||||=||||||||| targets:3627   GGUGUUUGUUUUUUGGUUGAAUAG   3650 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_485_Transcript_5/10_Confidence_0.429.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA167153.1	ncRNA:24   CCACAAACAAAAAAUCAACUUAUC   1   ||||||||||||||=||||||||| targets:3409   GGUGUUUGUUUUUUGGUUGAAUAG   3432 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_485_Transcript_1/10_Confidence_0.492.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA142774.1	ncRNA:24   CCACAAACAAAAAAUCAACUUAUC   1   **||||||||||||=||||||||| targets:1329   AAUGUUUGUUUUUUGGUUGAAUAG   1352 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_3457_Transcript_5/8_Confidence_0.474.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA142775.1	ncRNA:24   CCACAAACAAAAAAUCAACUUAUC   1   **||||||||||||=||||||||| targets:1229   AAUGUUUGUUUUUUGGUUGAAUAG   1252 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_3457_Transcript_8/8_Confidence_0.474.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA159067.1	ncRNA:24   CCACAAACAAAAAAUCAACUUAUC   1   *||*||||||||||=||||||||| targets:1282   CGUAUUUGUUUUUUGGUUGAAUAG   1305 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_4980_Transcript_3/7_Confidence_0.333.Vivi mRNA sequence	NA	coding protein	psRNATarget