ncRNA ID | novel_vvi_miR116 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr16:5436034-5436209 [-] |
Reference genome | 12X |
Source | SRR1049370 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGGCUAAUGGGUUCAAAGUAGACA - 24 |
Stem-loop(if miRNA) |
--        A GU   C     C    AA U       AU    ----   --A    C   U    CAUC        UA    GA    A   UCUGCUUU G  CCA UAGCC UCAC  C UUAAAAU  GUCU    ACA   AUAC AGA GAGU    CCUUAUAA  GUGU  AAGA A   |||||||| |  ||| ||||| ||||  | |||||||  ||||    |||   |||| ||| ||||    ||||||||  ||||  ||||   AGAUGAAA U  GGU AUCGG AGUG  G AAUUUUG  UAGA    UGU   UAUG UCU CUCA    GGAAUAUU  UACA  UUCU G AC        C UG   A     A    CG U       CG    UUGA   GCG    A   U    -ACA        --    -G    C |
Stem-loop sequence | UCUGCUUUAGGUCCACUAGCCCUCACAACUUUAAAAUAUGUCUACAAAUACCAGAUGAGUCAUCCCUUAUAAUAGUGUGAAAGAAAGCUCUUGACAUUUAUAAGGACAACUCUUCUAGUAUGCGUGUAGUUAGAUGCGUUUUAAUGGCGUGAAGGCUAAUGGGUUCAAAGUAGACA |