ncRNA ID | novel_vvi_miR115 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr16:11984984-11985208 [-] |
Reference genome | 12X |
Source | SRR1049370;SRR1048205;SRR1048207;SRR1048208;SRR1049295 |
Length | 24 |
Mature sequence(if miRNA) | 1 - AGCAGUUAUAUAUAAAAAACCAGU - 24 |
Stem-loop(if miRNA) |
--                                                                                              ---------U       AUUU   UGGUUUUUUAUGUAUAACUGCUCACUACAUUGAUAAUGAAUGGAAAUUAAAUAAAAGAAUAAUUUCAUUUAAAUUAAUAAAUGUUCCACAUAGU          UAACAUC    A   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||   ACCAAAAAAUAUAUAUUGACGAGUGAUGUAACUAUUACUUACCUUUAAUUUAUUUUUUUAUUAAAGUAAAUUUAAUUAUUUACGAGGUGUAUCA          AUUGUAG    U UG                                                                                              CCAUUUUUAU       AAAU |
Stem-loop sequence | UGGUUUUUUAUGUAUAACUGCUCACUACAUUGAUAAUGAAUGGAAAUUAAAUAAAAGAAUAAUUUCAUUUAAAUUAAUAAAUGUUCCACAUAGUUUAACAUCAUUUAUUAAAGAUGUUAUAUUUUUACCACUAUGUGGAGCAUUUAUUAAUUUAAAUGAAAUUAUUUUUUUAUUUAAUUUCCAUUCAUUAUCAAUGUAGUGAGCAGUUAUAUAUAAAAAACCAGU |