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BaseInfo

ncRNA ID novel_vvi_miR115
Species Vitis vinifera
Class miRNA
Genome position Chr16:11984984-11985208 [-]
Reference genome 12X
Source SRR1049370;SRR1048205;SRR1048207;SRR1048208;SRR1049295
Length 24
Mature sequence(if miRNA) 1 - AGCAGUUAUAUAUAAAAAACCAGU - 24
Stem-loop(if miRNA) --                                                                                              ---------U       AUUU
  UGGUUUUUUAUGUAUAACUGCUCACUACAUUGAUAAUGAAUGGAAAUUAAAUAAAAGAAUAAUUUCAUUUAAAUUAAUAAAUGUUCCACAUAGU          UAACAUC    A
  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||
  ACCAAAAAAUAUAUAUUGACGAGUGAUGUAACUAUUACUUACCUUUAAUUUAUUUUUUUAUUAAAGUAAAUUUAAUUAUUUACGAGGUGUAUCA          AUUGUAG    U
UG                                                                                              CCAUUUUUAU       AAAU
Stem-loop sequence UGGUUUUUUAUGUAUAACUGCUCACUACAUUGAUAAUGAAUGGAAAUUAAAUAAAAGAAUAAUUUCAUUUAAAUUAAUAAAUGUUCCACAUAGUUUAACAUCAUUUAUUAAAGAUGUUAUAUUUUUACCACUAUGUGGAGCAUUUAUUAAUUUAAAUGAAAUUAUUUUUUUAUUUAAUUUCCAUUCAUUAUCAAUGUAGUGAGCAGUUAUAUAUAAAAAACCAGU