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BaseInfo

ncRNA ID lus-miR169f
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - CAGCCAAGGAUGACUUGCCGG - NA
Stem-loop(if miRNA) U  UU    G    ---       ----   C         AG   G  A     UG  UC         UG        G    -CU    CCG
 GA  UUGC AAGU   AGAACAU    AGG CUGAGAUGA  ACG AG GAGCG  GU  AGCCAAGGA  ACUUGCCG ACGG   AGCU   G
 ||  |||| ||||   |||||||    ||| |||||||||  ||| || |||||  ||  |||||||||  |||||||| ||||   ||||   U
 CU  AACG UUUA   UCUUGUA    UCC GACUUUACU  UGU UC CUCGC  UA  UCGGUUCUU  UGAACGGC UGCU   UCGA   U
A  UC    G    CCC       UCUC   A         CU   -  A     GU  CA         GU        -    ACC    CUG
Stem-loop sequence UGAUUUUGCGAAGUAGAACAUAGGCCUGAGAUGAAGACGGAGAGAGCGUGGUUCAGCCAAGGAUGACUUGCCGGACGGCUAGCUCCGGUUGUCAGCUCCAUCGUCGGCAAGUUGUUCUUGGCUACAUUGCGCUCACUUGUUCUCAUUUCAGACCUCUCUAUGUUCUCCCAUUUGGCAACUUCA

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).