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BaseInfo

ncRNA ID novel_vvi_miR113
Species Vitis vinifera
Class miRNA
Genome position Chr14:12955869-12955944 [-]
Reference genome 12X
Source SRR1049370
Length 21
Mature sequence(if miRNA) 56 - GUCACUUCCAAAUAUGUCACC - 76
Stem-loop(if miRNA) -    CUUCCAAAUAUGUCACCAAUUGGUACCCUCUA
 GUCA                                U
 ||||                                G
 ACAG                                G
C    UAAUGUUGUAUCGCAGUGGAAGAGGUGACUGU
Stem-loop sequence GUCACUUCCAAAUAUGUCACCAAUUGGUACCCUCUAUGGUGUCAGUGGAGAAGGUGACGCUAUGUUGUAAUGACAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
FQ391801.1
ncRNA:21   CCACUGUAUAAACCUUCACUG   1
  ||||||=||||||||||||||
targets:1061   GGUGACGUAUUUGGAAGUGAC   1081

1.0 Vitis vinifera clone SS0AFA9YH17 NA coding protein psRNATarget
XM_010653091.2
ncRNA:21   CCACUGUAUAAACCUUCACUG   1
  ||||||=||||||||||||||
targets:1536   GGUGACGUAUUUGGAAGUGAC   1556

1.0 PREDICTED: Vitis vinifera leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2 (LOC100854198), transcript variant X3, mRNA NA coding protein psRNATarget
XM_019220353.1
ncRNA:21   CCACUGUAUAAACCUUCACUG   1
  ||||||=||||||||||||||
targets:1606   GGUGACGUAUUUGGAAGUGAC   1626

1.0 PREDICTED: Vitis vinifera leucine-rich repeat receptor-like serine/threonine-protein kinase BAM2 (LOC100854198), transcript variant X2, mRNA NA coding protein psRNATarget
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