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BaseInfo

ncRNA ID	novel_vvi_miR111
Species	Vitis vinifera
Class	miRNA
Genome position	Chr11:16185301-16185383 [+]
Reference genome	12X
Source	SRR1049296;SRR1048206;SRR1049290;SRR1049295
Length	21
Mature sequence(if miRNA)	1 - UGAGCCAAGGAUGACUUGCCG - 21
Stem-loop(if miRNA)	--                U     ---C UU   AUCAAGCAUU   UGAGCCAAGGAUGACU GCCGU    C  UGC          G   |||||||||||||||| |||||    |  |||   ACUCGGUUCUUAUUGA CGGCA    C  GGG          A UU                U     CGUA --   UCAAUUUCGA
Stem-loop sequence	UGAGCCAAGGAUGACUUGCCGUCCUUUGCAUCAAGCAUUGAAGCUUUAACUGGGCAUGCACGGCUAGUUAUUCUUGGCUCAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_019221448.1	ncRNA:21   GCCGUUCAGUAGGAACCGAGU   1   =||=||*|||||||||||||| targets:1376   UGGUAAUUCAUCCUUGGCUCA   1396 Target Full Sequence	2.0	PREDICTED: Vitis vinifera nuclear transcription factor Y subunit A-10 (LOC100255650), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010654961.2	ncRNA:21   GCCGUUCAGUAGGAACCGAGU   1   =||=||*|||||||||||||| targets:1395   UGGUAAUUCAUCCUUGGCUCA   1415 Target Full Sequence	2.0	PREDICTED: Vitis vinifera nuclear transcription factor Y subunit A-10 (LOC100255650), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_002263757.3	ncRNA:21   GCCGUUCAGUAGGAACCGAGU   1   =||=||*|||||||||||||| targets:1459   UGGUAAUUCAUCCUUGGCUCA   1479 Target Full Sequence	2.0	PREDICTED: Vitis vinifera nuclear transcription factor Y subunit A-10 (LOC100255650), transcript variant X1, mRNA	NA	coding protein	psRNATarget
KA146519.1	ncRNA:21   GCCGUUCAGUAGGAACCGA-GU   1   |||||||||||||||||||-|| targets:6   CGGCAAGUCAUCCUUGGCUGCA   27 Target Full Sequence	3.0	TSA: Vitis vinifera Locus_47228_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget