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BaseInfo

ncRNA ID	novel_vvi_miR109
Species	Vitis vinifera
Class	miRNA
Genome position	Chr1:6499922-6499993 [-]
Reference genome	12X
Source	SRR1049296;SRR1049372;SRR1528356;SRR1528361;SRR1528368;SRR1528370;SRR1048205;SRR1528371;SRR1048206;SRR1528381;SRR1528383;SRR1528386;SRR1528389;SRR1528404;SRR1528405;SRR1049289;SRR1528412;SRR1049294;SRR1049295
Length	21
Mature sequence(if miRNA)	1 - CUGAAGUGUUUGGGGGAACUC - 21
Stem-loop(if miRNA)	--       UG C       C      CCU  UC  G   GUUCCCU  A CACUUCA UGGGGA   UC  UA U   |||||||  | ||||||| ||||||   ||  ||   CAAGGGG  U GUGAAGU AUCCUU   AG  AU U CU       GU U       C      --C  UA  A
Stem-loop sequence	GUUCCCUUGACCACUUCACUGGGGACCUUCUCUAGUUAUAAUGACUUCCUACUGAAGUGUUUGGGGGAACUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA152876.1	ncRNA:21   CUCAAGGGGGUUUGUGAAGUC   1   |||*||=|||||||||||||| targets:128   GAGCUCUCCCAAACACUUCAG   148 Target Full Sequence	2.0	TSA: Vitis vinifera Locus_15568_Transcript_1/3_Confidence_0.600.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010665998.2	ncRNA:21   CUCAAGGGGGUUUGUGAAGUC   1   |||*||=|||||||||||||| targets:157   GAGCUCUCCCAAACACUUCAG   177 Target Full Sequence	2.0	PREDICTED: Vitis vinifera low affinity sulfate transporter 3 (LOC100252269), mRNA	NA	coding protein	psRNATarget
KA152875.1	ncRNA:21   CUCAAGGGGGUUUGUGAAGUC   1   |||*||=|||||||||||||| targets:325   GAGCUCUCCCAAACACUUCAG   345 Target Full Sequence	2.0	TSA: Vitis vinifera Locus_15568_Transcript_2/3_Confidence_0.600.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010654522.2	ncRNA:21   CUCAAGGGGGUUUGUGAAGUC   1   *|||||=|||||||||||||* targets:383   AAGUUCUCCCAAACACUUCAA   403 Target Full Sequence	2.0	PREDICTED: Vitis vinifera low affinity sulfate transporter 3 (LOC100257574), mRNA	NA	coding protein	psRNATarget