ncRNA ID | novel_vvi_miR108 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr1:9841028-9841240 [-] |
Reference genome | 12X |
Source | SRR1049296 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GAGUGUUCCCAAUAUAGAGAAAGA - 24 |
Stem-loop(if miRNA) |
--            A          --   -AA               A       U      CAA        AA                       CACCACACC   UUUCUCUAUAUU GGAACACUCA  GAG   AAAUUUAUUGUGUUA GUGAGUU UUUGCU   CGUUUUAA  ACUCGCAAAUGUGGAAUUUGAUA         C   |||||||||||| ||||||||||  |||   ||||||||||||||| ||||||| ||||||   ||||||||  |||||||||||||||||||||||         U   AAAGAGAUAUAA CCUUGUGAGU  UUC   UUUGAGUAACACGAU CACUCAA AGAUGA   GUAAAGUU  UGAGUGUUUACAUCUUAAACUAU         U AG            C          GG   CUA               -       U      UUC        AC                       AACAGAACA |
Stem-loop sequence | UUUCUCUAUAUUAGGAACACUCAGAGAAAAAUUUAUUGUGUUAAGUGAGUUUUUUGCUCAACGUUUUAAAAACUCGCAAAUGUGGAAUUUGAUACACCACACCCUUACAAGACAAUAUCAAAUUCUACAUUUGUGAGUCAUUGAAAUGCUUAGUAGAUAACUCACUAGCACAAUGAGUUUAUCCUUGGUGAGUGUUCCCAAUAUAGAGAAAGA |