ncRNA ID | novel_vvi_miR107 |
Species | Vitis vinifera |
Class | miRNA |
Genome position | Chr9:7352625-7352707 [+] |
Reference genome | 12X |
Source | SRR1049296 |
Length | 24 |
Mature sequence(if miRNA) | 1 - GGAAAUGGAUCUGGCGAAUCGCGA - 24 |
Stem-loop(if miRNA) |
--     U G     G G     -   -------G G  U   G      GGAAA G AUCUG C AAUCG CGA        U UC GAC AGCC   ||||| | ||||| | ||||| |||        | || ||| |||A   CCUUU C UAGAC G UUAGC GUU        G AG CUG UCGA GG     - G     - -     U   AAGUCUAA G  U   -    |
Stem-loop sequence | GGAAAUGGAUCUGGCGAAUCGCGAGUGUCUGACGAGCCAAGCUGUCUGAGGAAUCUGAAUUGUCGAUUGCAGAUGCUUUCCGG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
KA139621.1 |
|
1.5 | TSA: Vitis vinifera Locus_266_Transcript_17/41_Confidence_1.000.Vivi mRNA sequence | NA | coding protein | psRNATarget |