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BaseInfo

ncRNA ID lus-miR169e
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UGAGCCAAGGAUGACUUGCCG - NA
Stem-loop(if miRNA)     --     U GA  U     ----    A        U    CU          UG    G   CC      --AC A   UUC
GUGG  GGUAA G  UU CAUGG    UGGG UGGGGGAG AGGU  GAGCCAAGGA  ACUU CCG  GCUCAA    C CAA   C
||||  ||||| |  || |||||    |||| |||||||| ||||  ||||||||||  |||| |||  ||||||    | |||   A
CACC  UCAUU C  AA GUACC    ACCC GUUCCCUC UUCG  CUCGGUUCCU  UGAA GGU  CGGGUU    G GUU   U
    UA     U AG  U     UUUU    -        C    AU          GU    G   --      ACCU C   UCG
Stem-loop sequence GUGGGGUAAUGGAUUUCAUGGUGGGAUGGGGGAGUAGGUCUGAGCCAAGGAUGACUUGCCGCCGCUCAAACCACAAUUCCAUGCUUUGCGUCCAUUGGGCUGGGAAGUUGUCCUUGGCUCUAGCUUCCUCCCUUGCCCAUUUUCCAUGUAAGACUUUACUAUCCAC

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).