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BaseInfo

ncRNA ID novel_vvi_miR101
Species Vitis vinifera
Class miRNA
Genome position Chr9:21426921-21427011 [-]
Reference genome 12X
Source SRR1049296
Length 21
Mature sequence(if miRNA) 71 - GUAACCUGUUGACAUCAUCCA - 91
Stem-loop(if miRNA) --    C            UC        U    C     AUAUU
  GUAA CUGUUGACAUCA  CAAUAUAA UAAA UGAAC     G
  |||| ||||||||||||  |||||||| |||| |||||     A
  CAUU GAUAACUGUAGU  GUUGUAUU AUUU ACUUG     U
UU    A            CA        C    C     AAGAA
Stem-loop sequence GUAACCUGUUGACAUCAUCCAAUAUAAUUAAACUGAACAUAUUGAUAAGAAGUUCACUUUACUUAUGUUGACUGAUGUCAAUAGAUUACUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
KA161886.1
ncRNA:21   ACCUACUACAGUUGUCCAAUG   1
  |||||||||||||||*|||||
targets:281   UGGAUGAUGUCAACAUGUUAC   301

1.5 TSA: Vitis vinifera Locus_14723_Transcript_3/3_Confidence_0.750.Vivi mRNA sequence NA coding protein psRNATarget