Search result

BaseInfo

ncRNA ID novel_vvi_miR96
Species Vitis vinifera
Class miRNA
Genome position Chr8:19949167-19949295 [-]
Reference genome 12X
Source SRR1049296;SRR1048203;SRR1049370;SRR1049371;SRR1049373;SRR1528358;SRR1528370;SRR1528374;SRR1048201;SRR1528387;SRR1049289;SRR1049290;SRR1049291;SRR1049293;SRR1049294;SRR1049295
Length 22
Mature sequence(if miRNA) 108 - CACAUAUAAUUUUUUCCCGUCA - 129
Stem-loop(if miRNA) --   A              G     -  AC  A  AA   UUAAUA    -CA        C  CC
  CAC UAUAAUUUUUUCCC UCAAG CA  UU UC  GCA      GCAG   GCUUUCUU CA  A
  ||| |||||||||||||| ||||| ||  || ||  |||      ||||   |||||||| ||
  GUG AUAUUAAAAAGGGG AGUUC GU  AA AG  CGU      CGUU   UGAGAGAA GU  C
CU   C              A     U  --  A  -A   UCAAAC    AUA        C  UC
Stem-loop sequence CACAUAUAAUUUUUUCCCGUCAAGCAACUUAUCAAGCAUUAAUAGCAGCAGCUUUCUUCCACCACCUUGCAAGAGAGUAUAUUGCCAAACUUGCAGAAAAUGUCUUGAAGGGGAAAAAUUAUACGUGUC