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BaseInfo

ncRNA ID	novel_vvi_miR95
Species	Vitis vinifera
Class	miRNA
Genome position	Chr8:21104464-21104560 [+]
Reference genome	12X
Source	SRR1049296;SRR1048205;SRR1049294
Length	21
Mature sequence(if miRNA)	1 - CAGCCAAGGAUGACUUGCCGA - 21
Stem-loop(if miRNA)	--C         UG        A  C  UAC    CCAU    CUU    C    AGCCAAGGA  ACUUGCCG CU UC   UUAG    CUGC   UCUC A    |||||||||  |||||||| || ||   ||||    ||||   ||||    UCGGUUUCU  UGAACGGC GA AG   AGUC    GACG   GGAG A ACA         GU        C  -  --U    --AU    UUC    G
Stem-loop sequence	CAGCCAAGGAUGACUUGCCGACUCUCUACUUAGCCAUCUGCCUUUCUCCAAGGAGGCUUGCAGUACUGAUGAAGCCGGCAAGUUGUCUUUGGCUACA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
KA146519.1	ncRNA:21   AGCCGUUCAGUAGGAACCGAC   1   *|||||||||||||||||||| targets:5   CCGGCAAGUCAUCCUUGGCUG   25 Target Full Sequence	0.0	TSA: Vitis vinifera Locus_47228_Transcript_1/1_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010656181.2	ncRNA:21   AGCCGUUCAGUAGGAACCGAC   1   |=||*|||||||||||||||| targets:804   UUGGAAAGUCAUCCUUGGCUG   824 Target Full Sequence	1.0	PREDICTED: Vitis vinifera nuclear transcription factor Y subunit A-3 (LOC100249800), transcript variant X5, mRNA	NA	coding protein	psRNATarget
KA170941.1	ncRNA:21   AGCCGUUCAGUAGGAACCGAC   1   |=||*|||||||||||||||| targets:974   UUGGAAAGUCAUCCUUGGCUG   994 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_10060_Transcript_1/3_Confidence_0.600.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010656180.2	ncRNA:21   AGCCGUUCAGUAGGAACCGAC   1   |=||*|||||||||||||||| targets:972   UUGGAAAGUCAUCCUUGGCUG   992 Target Full Sequence	1.0	PREDICTED: Vitis vinifera nuclear transcription factor Y subunit A-3 (LOC100249800), transcript variant X4, mRNA	NA	coding protein	psRNATarget
KA170942.1	ncRNA:21   AGCCGUUCAGUAGGAACCGAC   1   |=||*|||||||||||||||| targets:1029   UUGGAAAGUCAUCCUUGGCUG   1049 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_10060_Transcript_2/3_Confidence_0.400.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_002274422.3	ncRNA:21   AGCCGUUCAGUAGGAACCGAC   1   |=||*|||||||||||||||| targets:1407   UUGGAAAGUCAUCCUUGGCUG   1427 Target Full Sequence	1.0	PREDICTED: Vitis vinifera nuclear transcription factor Y subunit A-3 (LOC100249800), transcript variant X1, mRNA	NA	coding protein	psRNATarget
KA170940.1	ncRNA:21   AGCCGUUCAGUAGGAACCGAC   1   |=||*|||||||||||||||| targets:1516   UUGGAAAGUCAUCCUUGGCUG   1536 Target Full Sequence	1.0	TSA: Vitis vinifera Locus_10060_Transcript_3/3_Confidence_0.600.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_010656177.2	ncRNA:21   AGCCGUUCAGUAGGAACCGAC   1   |=||*|||||||||||||||| targets:1523   UUGGAAAGUCAUCCUUGGCUG   1543 Target Full Sequence	1.0	PREDICTED: Vitis vinifera nuclear transcription factor Y subunit A-3 (LOC100249800), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010656179.2	ncRNA:21   AGCCGUUCAGUAGGAACCGAC   1   |=||*|||||||||||||||| targets:2189   UUGGAAAGUCAUCCUUGGCUG   2209 Target Full Sequence	1.0	PREDICTED: Vitis vinifera nuclear transcription factor Y subunit A-3 (LOC100249800), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_019221448.1	ncRNA:21   AGCCGUUCAGUAGGAACCGAC   1   *=||=||*||||||||||||* targets:1375   AUGGUAAUUCAUCCUUGGCUC   1395 Target Full Sequence	3.0	PREDICTED: Vitis vinifera nuclear transcription factor Y subunit A-10 (LOC100255650), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_010654961.2	ncRNA:21   AGCCGUUCAGUAGGAACCGAC   1   *=||=||*||||||||||||* targets:1394   AUGGUAAUUCAUCCUUGGCUC   1414 Target Full Sequence	3.0	PREDICTED: Vitis vinifera nuclear transcription factor Y subunit A-10 (LOC100255650), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_002263757.3	ncRNA:21   AGCCGUUCAGUAGGAACCGAC   1   *=||=||*||||||||||||* targets:1458   AUGGUAAUUCAUCCUUGGCUC   1478 Target Full Sequence	3.0	PREDICTED: Vitis vinifera nuclear transcription factor Y subunit A-10 (LOC100255650), transcript variant X1, mRNA	NA	coding protein	psRNATarget