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BaseInfo

ncRNA ID lus-miR169c
Species Linum usitatissimum
Class miRNA
Genome position NA
Reference genome NA
Source miRBase
Length 21
Mature sequence(if miRNA) NA - UAGCCAAGGAUGACUUGCCUG - NA
Stem-loop(if miRNA)       -    UU          -A         CAA     U   -        A     U     - -U   -----     UUUC         GGU
AGAAAA GAGG  GCUAACAUGA  GAGAGAAGC   UUGUU GGU AGCCAAGG UGACU GCCUG C  CCU     AGACA    GAUUUUCGA   U
|||||| ||||  ||||||||||  |||||||||   ||||| ||| |||||||| ||||| ||||| |  |||     |||||    |||||||||
UCUUUU CUCC  CGAUUGUACU  CUCUCUUCG   AACAG UCA UCGGUUCC ACUGA CGGAC G  GGA     UUUGU    CUAAAGGCU   U
      A    -C          CC         ---     U   A        -     -     U UU   CAAGA     --UA         AGG
Stem-loop sequence AGAAAAGAGGUUGCUAACAUGAAGAGAGAAGCCAAUUGUUUGGUAGCCAAGGAUGACUUGCCUGCUCCUAGACAUUUCGAUUUUCGAGGUUUGGAUCGGAAAUCAUUGUUUAGAACAGGUUGUCAGGCAGUCACCUUGGCUAACUUGACAAGCUUCUCUCCCUCAUGUUAGCCCCUCAUUUUCU

Reference

1 PMID:23291876
"Genome-wide identification and characterization of microRNA genes and their targets in flax (Linum usitatissimum): Characterization of flax miRNA genes";
Barvkar VT, Pardeshi VC, Kale SM, Qiu S, Rollins M, Datla R, Gupta VS, Kadoo NY;
Planta. 237:1149-1161(2013).