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BaseInfo

ncRNA ID	novel_vvi_miR83
Species	Vitis vinifera
Class	miRNA
Genome position	Chr7:14340432-14340493 [+]
Reference genome	12X
Source	SRR1049296;SRR1528353;SRR1528356;SRR1528357;SRR1528358;SRR1528359;SRR1528364;SRR1528370;SRR1528375;SRR1528380;SRR1528381;SRR1528383;SRR1528384;SRR1528387;SRR1528389;SRR1528391;SRR1528393;SRR1528396;SRR1528399;SRR1528401;SRR1049289;SRR1528408;SRR1528412;SRR1528413;SRR1528417;SRR2029783;SRR2029784;SRR890731
Length	21
Mature sequence(if miRNA)	1 - UUCCAUCUCUUGCACACUGGA - 21
Stem-loop(if miRNA)	--         U       UG   --    GC   UUCCAUCUC UGCACAC  GAC  CAGC  U   ||||||||| |||||||  |||  ||||   AAGGUAGGG ACGUGUG  UUG  GUCG  C AU         C       GU   AC    AC
Stem-loop sequence	UUCCAUCUCUUGCACACUGGACCAGCGCUCCAGCUGCAGUUUGGUGUGCACGGGAUGGAAUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_010650181.2	ncRNA:21   AGGUCACACGUUCUCUACCUU   1   |=||||||||||*|||||||| targets:353   UUCAGUGUGCAAAAGAUGGAA   373 Target Full Sequence	1.5	PREDICTED: Vitis vinifera F-box only protein 13 (LOC100262953), mRNA	NA	coding protein	psRNATarget
FQ393991.1	ncRNA:21   AGGUCACACGUUCUCUACCUU   1   ||*|*|*|||||||||||||| targets:342   UCAACUUUGCAAGAGAUGGAA   362 Target Full Sequence	3.0	Vitis vinifera clone SS0AFA23YC22	NA	coding protein	psRNATarget
FQ391985.1	ncRNA:21   AGGUCACACGUUCUCUACCUU   1   ||*|*|*|||||||||||||| targets:388   UCAACUUUGCAAGAGAUGGAA   408 Target Full Sequence	3.0	Vitis vinifera clone SS0AFA8YB11	NA	coding protein	psRNATarget
FQ398040.1	ncRNA:21   AGGUCACACGUUCUCUACCUU   1   ||*|*|*|||||||||||||| targets:390   UCAACUUUGCAAGAGAUGGAA   410 Target Full Sequence	3.0	Vitis vinifera clone SS0AEB4YN14	NA	coding protein	psRNATarget
FQ384350.1	ncRNA:21   AGGUCACACGUUCUCUACCUU   1   ||*|*|*|||||||||||||| targets:391   UCAACUUUGCAAGAGAUGGAA   411 Target Full Sequence	3.0	Vitis vinifera clone SS0AAG1YN15	NA	coding protein	psRNATarget
XM_002276322.4	ncRNA:21   AGGUCACACGUUCUCUACCUU   1   ||*|*|*|||||||||||||| targets:511   UCAACUUUGCAAGAGAUGGAA   531 Target Full Sequence	3.0	PREDICTED: Vitis vinifera PHD finger protein ALFIN-LIKE 4 (LOC100263503), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_019222320.1	ncRNA:21   AGGUCACACGUUCUCUACCUU   1   ||*|*|*|||||||||||||| targets:525   UCAACUUUGCAAGAGAUGGAA   545 Target Full Sequence	3.0	PREDICTED: Vitis vinifera PHD finger protein ALFIN-LIKE 4 (LOC100263503), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_003635033.1	ncRNA:21   AGGUCACACGUUCUCUACCUU   1   ||*||**|||||||||||||| targets:17   UCAAGGCUGCAAGAGAUGGAA   37 Target Full Sequence	3.0	PREDICTED: Vitis vinifera ankyrin repeat-containing protein ITN1 (LOC100852638), mRNA	NA	coding protein	psRNATarget