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BaseInfo

ncRNA ID	novel_vvi_miR81
Species	Vitis vinifera
Class	miRNA
Genome position	Chr7:7091336-7091426 [+]
Reference genome	12X
Source	SRR1049296
Length	23
Mature sequence(if miRNA)	1 - UGAUUUUAAGAAGUGUUUAUAGU - 23
Stem-loop(if miRNA)	--        AG        A          U          UUU   UGAUUUUA  AAGUGUUU UAGUAUUUCU AUAUUUGAAA   U   ||||||||  |||||||| |||||||||| ||||||||||   U   ACUAAAAU  UUUAUAAA AUUGUAAAGA UAUGAAUUUU   U UU        CU        A          U          CUA
Stem-loop sequence	UGAUUUUAAGAAGUGUUUAUAGUAUUUCUUAUAUUUGAAAUUUUUUAUCUUUUAAGUAUUAGAAAUGUUAAAAAUAUUUUCUAAAAUCAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
FQ390097.1	ncRNA:23   UGAUAUUUGUGAAGAAUUUUAGU   1   |=||*|||||||||||||||||| targets:1181   AUUAGAAACACUUCUUAAAAUCA   1203 Target Full Sequence	1.0	Vitis vinifera clone SS0AEB18YL19	NA	coding protein	psRNATarget
XM_002279172.4	ncRNA:23   UGAUAUUUGUGAAGAAUUUUAGU   1   |=||*|||||||||||||||||| targets:1240   AUUAGAAACACUUCUUAAAAUCA   1262 Target Full Sequence	1.0	PREDICTED: Vitis vinifera peroxidase 20 (LOC100262575), mRNA	NA	coding protein	psRNATarget
XM_002272286.4	ncRNA:23   UGAUAUUUGUGAAGAAUUUUAGU   1   ||||||||||=|||||||||||| targets:1766   ACUAUAAACAUUUCUUAAAAUCA   1788 Target Full Sequence	1.5	PREDICTED: Vitis vinifera uncharacterized LOC100264629 (LOC100264629), transcript variant X1, mRNA	NA	coding protein	psRNATarget
KA154839.1	ncRNA:23   UGAUAUUUGUGAAGAAUUUUAGU   1   |=||*|||||||||*|||||||| targets:2677   AUUAGAAACACUUCCUAAAAUCA   2699 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_4953_Transcript_6/7_Confidence_0.478.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA146990.1	ncRNA:23   UGAUAUUUGUGAAGAAUUUUAGU   1   ==||*|||||||||*|||||||| targets:3461   GUUAAAAACACUUCCUAAAAUCA   3483 Target Full Sequence	2.5	TSA: Vitis vinifera Locus_5272_Transcript_7/11_Confidence_0.333.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA172019.1	ncRNA:23   UGAUAUUUGUGAAGAAUUUUAGU   1   ==||*||=|=||||||||||||| targets:11   GUUAAAAGCGCUUCUUAAAAUCA   33 Target Full Sequence	3.0	TSA: Vitis vinifera Locus_11908_Transcript_4/5_Confidence_0.692.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA172018.1	ncRNA:23   UGAUAUUUGUGAAGAAUUUUAGU   1   ==||*||=|=||||||||||||| targets:11   GUUAAAAGCGCUUCUUAAAAUCA   33 Target Full Sequence	3.0	TSA: Vitis vinifera Locus_11908_Transcript_1/5_Confidence_0.692.Vivi mRNA sequence	NA	coding protein	psRNATarget