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BaseInfo

ncRNA ID	novel_vvi_miR80
Species	Vitis vinifera
Class	miRNA
Genome position	Chr7:3287478-3287578 [-]
Reference genome	12X
Source	SRR1049296;SRR1528358;SRR1528359;SRR1528361;SRR1528363;SRR1528370;SRR1528375;SRR1528376;SRR1528377;SRR1528380;SRR1528381;SRR1048207;SRR1528383;SRR1528387;SRR1528391;SRR1049289;SRR1528408;SRR1528410;SRR1049290;SRR2029783;SRR1049294;SRR1049295
Length	21
Mature sequence(if miRNA)	81 - UGGAGAAGCAGGGCACGUGCA - 101
Stem-loop(if miRNA)	--        CA          -A  UUUGCCUCACUUUUCCCCCUUUUUU   UGGAGAAG  GGGCACGUGC  GA                         C   ||||||||  ||||||||||  ||   ACCUCUUC  CUCGUGCACG  CG                         U CA        CC          UU  GACACCCGCCACCACCCUCAUUUCU
Stem-loop sequence	UGGAGAAGCAGGGCACGUGCAGAUUUGCCUCACUUUUCCCCCUUUUUUCUUCUUUACUCCCACCACCGCCCACAGGCUUGCACGUGCUCCCCUUCUCCAAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_002284789.3	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   **||||||||||||||||||| targets:1002   CUCACGUGCCCUGCUUCUCCA   1022 Target Full Sequence	0.0	PREDICTED: Vitis vinifera NAC domain-containing protein 100-like (LOC100251801), mRNA	NA	coding protein	psRNATarget
XM_010645872.2	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   *||||||||||||*||||||| targets:1330   AGCACGUGCCCUGGUUCUCCA   1350 Target Full Sequence	1.5	PREDICTED: Vitis vinifera protein CUP-SHAPED COTYLEDON 2 (LOC100246914), mRNA	NA	coding protein	psRNATarget
KA145008.1	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   **||||||*|||||||||||| targets:576   CUCACGUGACCUGCUUCUCCA   596 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_18694_Transcript_3/4_Confidence_0.500.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA145009.1	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   **||||||*|||||||||||| targets:801   CUCACGUGACCUGCUUCUCCA   821 Target Full Sequence	1.5	TSA: Vitis vinifera Locus_18694_Transcript_4/4_Confidence_0.625.Vivi mRNA sequence	NA	coding protein	psRNATarget
XM_002283775.3	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   **||||||*|||||||||||| targets:947   CUCACGUGACCUGCUUCUCCA   967 Target Full Sequence	1.5	PREDICTED: Vitis vinifera NAC domain-containing protein 100 (LOC100250998), mRNA	NA	coding protein	psRNATarget
XM_002271422.3	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   *|||*|||||||||||||||= targets:741   AGCAAGUGCCCUGCUUCUCCG   761 Target Full Sequence	2.0	PREDICTED: Vitis vinifera NAC domain-containing protein 21/22 (LOC100254239), mRNA	NA	coding protein	psRNATarget
KA155909.1	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   *|||*|||||||||||||||= targets:841   AGCAAGUGCCCUGCUUCUCCG   861 Target Full Sequence	2.0	TSA: Vitis vinifera Locus_21942_Transcript_2/2_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget
KA155908.1	ncRNA:21   ACGUGCACGGGACGAAGAGGU   1   *|||*|||||||||||||||= targets:1693   AGCAAGUGCCCUGCUUCUCCG   1713 Target Full Sequence	2.0	TSA: Vitis vinifera Locus_21942_Transcript_1/2_Confidence_1.000.Vivi mRNA sequence	NA	coding protein	psRNATarget